BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026E05LP1|AL428559
(640 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig941 622 e-178
>3x_Contig941
Length = 3149
Score = 622 bits (297), Expect = e-178
Identities = 383/432 (88%), Gaps = 2/432 (0%)
Strand = Plus / Plus
Query: 1 ctcagaattacacccatngagcaaatgcagtttttgcccttgtgctatgcagtaatggca 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2673 ctcagaattacacccat-gagcaaatgcagtttttgcccttgtgctatgcagtaatggca 2731
Query: 61 gttggtaccctctttaccaaaactgtaaacarattgaatgtcaatcaacaatcccctaat 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 2732 gttggtaccctctttaccaaaactgtaaacagattgaatgtcaatcaacaatcccctaat 2791
Query: 121 aacattaataatgatgatgatagtaatactaawaawaatactaawrctgatattaacact 180
||||||||| |||||||||||||||||||||| || |||||||| ||||||||||||||
Sbjct: 2792 aacattaatgatgatgatgatagtaatactaataataatactaatgctgatattaacact 2851
Query: 181 gatactaatacwcctgawtccaatactaawaahaahaccaataataawaccaataataac 240
||||||||||| ||||| ||||||||||| || || ||||||||||| ||||||||||||
Sbjct: 2852 gatactaatactcctgattccaatactaataataataccaataataataccaataataac 2911
Query: 241 accaataataawaataataawavtagtratgctnctacaaaattcttncaanatnaaagg 300
||||||||||| |||||||| | |||| ||||| ||||||| ||||| ||| || || ||
Sbjct: 2912 accaataataataataataatagtagtgatgcttctacaaagttcttgcaagatgaaggg 2971
Query: 301 aacaaatattthmhwgcagcaagaaagttgattgacatcacaaatrccaramacttgaat 360
|||||||||| |||||||||||||||||||||||||||||| ||| | ||||||||
Sbjct: 2972 gacaaatattttattgcagcaagaaagttgattgacatcacaaatgccagagacttgaat 3031
Query: 361 wcaatwcaaaccattgtmctwacathccttthcttncaannctcnnccagactatccacr 420
|||| |||| |||||| || || ||||| ||| ||| ||| |||||||||||||
Sbjct: 3032 tcaattcaaa-cattgttcttttattccttttcttgcaatgctctgccagactatccacg 3090
Query: 421 arcwactcthat 432
| | ||||| ||
Sbjct: 3091 agctactcttat 3102
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.45 0.721 1.37
Gapped
Lambda K H
1.45 0.721 1.37
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2537
Number of Sequences: 1807
Number of extensions: 2537
Number of successful extensions: 69
Number of sequences better than 1.0e-20: 1
length of query: 640
length of database: 10,358,551
effective HSP length: 16
effective length of query: 624
effective length of database: 10,329,639
effective search space: 6445694736
effective search space used: 6445694736
T: 0
A: 40
X1: 5 (10.5 bits)
X2: 14 (29.3 bits)
S1: 11 (23.5 bits)
S2: 48 (101.1 bits)